Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTATGCTGGGG
.((((((((((...........&)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001258
GeneSymbolCDK3
Binding site776,787
Score0.846
Seed1
Au0.441
Energy-16.5
Binding len11
Me-10.255
Phylopstem5.327616
Phylopflank4.0759291325
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure