Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TGCTGCCCCAGCTGCC
..(((((((.(((.(((....&))).))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001258
GeneSymbolCDK3
Binding site1083,1099
Score0.923
Seed1
Au0.426
Energy-19.9
Binding len16
Me-7.056
Phylopstem-0.48292685714285716
Phylopflank-0.03938131075000002
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure