Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTTCGACACCAGCTGTGAT
(((((((((..((((.((((.&))))))))..))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001258005
GeneSymbolCHIA
Binding site1332,1352
Score0.846
Seed1
Au0.426
Energy-20.0
Binding len20
Me-8.238
Phylopstem1.0374848
Phylopflank0.9175200374999999
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure