Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TGCTGCAGTAGCTGCT
..((((((((.((.(((....&))).)).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001258005
GeneSymbolCHIA
Binding site481,497
Score0.846
Seed1
Au0.471
Energy-18.4
Binding len16
Me-8.639
Phylopstem6.3897710000000005
Phylopflank6.064570377499999
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure