Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTCAGCCTACCACTGCAGA
((((((.((.(((((.(((((&))))))))))...)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001258019
GeneSymbolGRIA1
Binding site4732,4754
Score0.846
Seed0
Au0.529
Energy-20.1
Binding len22
Me-6.957
Phylopstem0.5089471666666666
Phylopflank0.57088628875
Longest consecutive pairings10
Position of longest consecutive pairings12
Pairings in 3prime end7
Position3UTR
2D Structure