Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCAAGATTGCTGTGGCTGCGC
.((((((((((((.((..((.&))...)).)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001258026
GeneSymbolTPI1
Binding site462,483
Score0.897
Seed1
Au0.456
Energy-19.4
Binding len21
Me-4.65
Phylopstem5.851729708333334
Phylopflank4.99617345625
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end4
Position5UTR
2D Structure