Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTGCATTCATCCTACTGCAGTTGG
...((((((((((((((((((&))))))))........)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001258031
GeneSymbolSERINC4
Binding site799,826
Score0.846
Seed0
Au0.515
Energy-21.3
Binding len27
Me-6.515
Phylopstem-0.12477463846153848
Phylopflank0.33527289089500006
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure