Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACATGGCATCCTGCAGCTGCGGC
((((((((((((.(((...((&))...)))..)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001258033
GeneSymbolPOLR3E
Binding site553,576
Score0.923
Seed1
Au0.426
Energy-22.9
Binding len23
Me-5.227
Phylopstem4.514671000000001
Phylopflank4.72630567375
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure