Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTTGCAGCCGTGTCTGAGGGCTGCGT
.(((((((((((((((((((.&)))))))))))).......))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001258205
GeneSymbolTRPV3
Binding site507,534
Score0.846
Seed1
Au0.412
Energy-26.0
Binding len27
Me-3.793
Phylopstem0.4987186153846154
Phylopflank0.36751860000000003
Longest consecutive pairings12
Position of longest consecutive pairings15
Pairings in 3prime end7
PositionCDS
2D Structure