Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCACGCCGCTGCAGCTGG
...(((((((((((((.((((&)))).)))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001258205
GeneSymbolTRPV3
Binding site1160,1181
Score1.0
Seed0
Au0.338
Energy-23.8
Binding len21
Me-6.515
Phylopstem-0.5412462133333332
Phylopflank0.03880393999999998
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure