Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGGACCGTGTGGCCGCAGCCCGGGAGGACGTGCAGA
(((((((((((((((((.(((&.))).))))))))))))...........))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001258207
GeneSymbolVAV1
Binding site881,920
Score0.923
Seed1
Au0.368
Energy-22.2
Binding len34
Me-3.938
Phylopstem1.494109207142857
Phylopflank3.8605997074999996
Longest consecutive pairings12
Position of longest consecutive pairings17
Pairings in 3prime end7
PositionCDS
2D Structure