Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TATGGCCGCTACTGCAGC
((((((..(((((((((....&)))))))))..)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001258207
GeneSymbolVAV1
Binding site841,859
Score0.846
Seed0
Au0.426
Energy-20.7
Binding len18
Me-7.795
Phylopstem3.4705890111111115
Phylopflank2.8993885537500006
Longest consecutive pairings9
Position of longest consecutive pairings9
Pairings in 3prime end4
PositionCDS
2D Structure