Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCAGCTCCCTGCGAAGAGCAGCCCAGCTGCAGA
(((((((((.((((((.....&.))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001258209
GeneSymbolHMBS
Binding site676,710
Score0.923
Seed1
Au0.412
Energy-25.1
Binding len17
Me-5.18
Phylopstem5.524618666666667
Phylopflank3.9327354875
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure