Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACGGCAATGCGGCTGCAAC
((((((((((((((((.....&)))))..))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001258209
GeneSymbolHMBS
Binding site163,182
Score1.0
Seed1
Au0.368
Energy-21.7
Binding len19
Me-3.938
Phylopstem0.4723851111111111
Phylopflank0.2529221675000003
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end3
Position5UTR
2D Structure