Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTTTTAGCAAAATGGAGCAACTGTTTTTGCAGCTGA
...((((((((((((((((((&)))))..............))))))......))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001258218
GeneSymbolMIS12
Binding site388,427
Score0.923
Seed0
Au0.632
Energy-19.0
Binding len39
Me-6.515
Phylopstem3.8113013
Phylopflank2.8394092725
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure