Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAAAAAAGAAAAAAAAAAAAGGTGACAGCCGCAGTTGG
...(((((((((((((.....&.))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001258221
GeneSymbolKCTD1
Binding site1117,1156
Score1.0
Seed0
Au0.515
Energy-23.8
Binding len15
Me-6.515
Phylopstem2.9175193846153844
Phylopflank4.569901775
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure