Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAAAAAAGAAAAAAAAAAAAGGTGACAGCCGCAGTTGG
...(((((((((((((.....&.))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001258222
GeneSymbolKCTD1
Binding site1140,1179
Score0.923
Seed0
Au0.515
Energy-23.8
Binding len15
Me-6.515
Phylopstem4.895741076923075
Phylopflank3.9115986374999996
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure