Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGCAGCCGGAGGGCT
..((..((.(((((((((((.&))))))))))).)).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001258248
GeneSymbolSP6
Binding site2841,2859
Score1.0
Seed0
Au0.382
Energy-24.2
Binding len18
Me-12.033
Phylopstem2.5163243636363632
Phylopflank1.9908228875
Longest consecutive pairings11
Position of longest consecutive pairings7
Pairings in 3prime end7
Position3UTR
2D Structure