Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGGATGCTGCTGTTGACAT
.((((((.((((((.(((((.&))))).).))))).)))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001258272
GeneSymbolWDR89
Binding site690,712
Score0.808
Seed1
Au0.588
Energy-17.5
Binding len22
Me-6.842
Phylopstem0.5019778571428571
Phylopflank0.13789902625000003
Longest consecutive pairings5
Position of longest consecutive pairings17
Pairings in 3prime end6
Position5UTR
2D Structure