Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTCACAAAGGTGGACGACTGTGTTACAGCCTTGGCTGCGC
.((((((((.((((((((.(.&.).)))))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001258275
GeneSymbolSAMD3
Binding site2416,2457
Score0.846
Seed1
Au0.529
Energy-23.0
Binding len21
Me-5.036
Phylopstem2.1112645000000003
Phylopflank0.08140679499999992
Longest consecutive pairings8
Position of longest consecutive pairings10
Pairings in 3prime end6
PositionCDS
2D Structure