Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GACCGCGGCTGCC
..((((((((((((.......&)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001258276
GeneSymbolTMEM200A
Binding site342,355
Score0.923
Seed1
Au0.206
Energy-24.0
Binding len13
Me-5.925
Phylopstem0.8590465000000002
Phylopflank3.838712983750001
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end1
Position5UTR
2D Structure