Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GACCGCGGCTGCC
..((((((((((((.......&)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001258277
GeneSymbolTMEM200A
Binding site342,355
Score0.923
Seed1
Au0.206
Energy-24.0
Binding len13
Me-5.925
Phylopstem0.08075383333333334
Phylopflank0.4967148374999999
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end1
Position5UTR
2D Structure