Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTGTGACTGCAGTA
.....((((((((((((((..&)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001258278
GeneSymbolTMEM200A
Binding site1923,1938
Score0.923
Seed0
Au0.647
Energy-17.2
Binding len15
Me-13.666
Phylopstem0.7142010357142857
Phylopflank1.03037841075
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure