Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTATGACCGCTATGTGGCCATCTGCAAA
((((((((((((((((.(((.&))))))))))).....)))....))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001258285
GeneSymbolOR2AP1
Binding site699,728
Score1.0
Seed1
Au0.471
Energy-18.8
Binding len29
Me-3.938
Phylopstem1.3322612400000002
Phylopflank-0.67351858375
Longest consecutive pairings11
Position of longest consecutive pairings18
Pairings in 3prime end6
PositionCDS
2D Structure