Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCTGCCATGAACAAGAGAATTCATTACTACAGCCGGCTCACCACTCCTGCAGA
((((((...((((((((((((&))))..........................))))))))...........)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001258286
GeneSymbolSLC38A9
Binding site531,587
Score0.846
Seed0
Au0.471
Energy-16.5
Binding len56
Me-8.851
Phylopstem0.5247126921052634
Phylopflank0.6416194812499999
Longest consecutive pairings8
Position of longest consecutive pairings18
Pairings in 3prime end8
Position5UTR
2D Structure