Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGATCACCGACATCCTGCTCTCCCTGGACGACCGCTTCCTCTACTTCAGCAACTGGCTGCAT
.(((((((((((((((.(((.&.)))..))))))))...................))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001258288
GeneSymbolSELENBP1
Binding site800,865
Score0.923
Seed1
Au0.441
Energy-25.3
Binding len41
Me-3.793
Phylopstem3.311964085294118
Phylopflank3.8608166200000005
Longest consecutive pairings8
Position of longest consecutive pairings27
Pairings in 3prime end6
PositionCDS
2D Structure