Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGGACGACCGCTTCCTCTACTTCAGCAACTGGCTGCAT
.(((((((((((((((.(((.&)))..))))))))...................))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001258289
GeneSymbolSELENBP1
Binding site1220,1260
Score0.846
Seed1
Au0.441
Energy-24.9
Binding len40
Me-3.793
Phylopstem3.575866764705882
Phylopflank3.14418726325
Longest consecutive pairings8
Position of longest consecutive pairings27
Pairings in 3prime end6
PositionCDS
2D Structure