Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTGGGGCCAGGTG
(((((((.(((...........&)))..))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001258294
GeneSymbolNFATC2
Binding site4146,4159
Score0.846
Seed1
Au0.485
Energy-15.5
Binding len13
Me-12.712
Phylopstem-0.0785051857142857
Phylopflank0.36922031
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure