Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCAGCATGTAGCTGTCAGGTG
(((((((((((.((((.((...&)).)))))))..)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001258298
GeneSymbolSHTN1
Binding site3089,3110
Score0.846
Seed1
Au0.603
Energy-15.9
Binding len21
Me-7.284
Phylopstem1.2055376153846153
Phylopflank1.4091574949999996
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure