Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACAGCTCGGACGAAGAGAAGCAGCTGCAGC
((((((((((((((((.....&)))))).............)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001258298
GeneSymbolSHTN1
Binding site112,142
Score0.846
Seed1
Au0.5
Energy-21.2
Binding len30
Me-3.938
Phylopstem-0.6704281379310344
Phylopflank-0.20506305124999996
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
Position5UTR
2D Structure