Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGCAGAGCCCGCAGCTCAGGCAGA
((((((((((((((.(..(((&)))..).)))).))))))...)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001258307
GeneSymbolCCDC74B
Binding site220,246
Score1.0
Seed1
Au0.338
Energy-21.7
Binding len26
Me-4.673
Phylopstem-0.22504468888888893
Phylopflank-0.06659886500000003
Longest consecutive pairings6
Position of longest consecutive pairings8
Pairings in 3prime end5
PositionCDS
2D Structure