Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAAGAAAGCCAAGGGGGCTGCAAAGACAAAGCAGCAGCTGCAGA
((((((((((..((((.....&.))))....)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001258309
GeneSymbolNOP2
Binding site2054,2100
Score0.923
Seed1
Au0.456
Energy-21.2
Binding len20
Me-10.109
Phylopstem2.9726852
Phylopflank0.8464471
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure