Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAAGAAAGCCAAGGGGGCTGCAAAGACAAAGCAGCAGCTGCAGA
((((((((((..((((.....&.))))....)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001258310
GeneSymbolNOP2
Binding site2065,2111
Score1.0
Seed1
Au0.456
Energy-21.2
Binding len20
Me-10.109
Phylopstem0.324917
Phylopflank1.4596749249999998
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure