Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACAGCCAGCTGCTGCT
..(((((.((((((((.....&)))))).)).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001258310
GeneSymbolNOP2
Binding site2615,2631
Score0.846
Seed0
Au0.5
Energy-20.6
Binding len16
Me-7.271
Phylopstem2.580418
Phylopflank2.91125744
Longest consecutive pairings6
Position of longest consecutive pairings10
Pairings in 3prime end3
Position3UTR
2D Structure