Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAGCCGTGGTGACTCTACAGGGTGTGGAGCCAGGTT
(((((((((((..((((((...&.))))))..))))...))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001258311
GeneSymbolPGBD5
Binding site8055,8091
Score0.846
Seed1
Au0.397
Energy-23.4
Binding len24
Me-8.574
Phylopstem-0.6527331571428573
Phylopflank-0.08148644249999998
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure