Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAACCGCAGCCTCGCC
..((.(((((((((((.....&)))))))))))...)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001258311
GeneSymbolPGBD5
Binding site987,1004
Score0.846
Seed0
Au0.368
Energy-22.4
Binding len17
Me-9.076
Phylopstem-1.1718729454545453
Phylopflank-0.6453561937500001
Longest consecutive pairings11
Position of longest consecutive pairings6
Pairings in 3prime end3
PositionCDS
2D Structure