Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGTTTTATCTACAGACATGTCAGGTC
(((((((((....(((((((..&.)))))))...))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001258314
GeneSymbolPDE1A
Binding site1007,1033
Score0.846
Seed1
Au0.691
Energy-20.5
Binding len21
Me-12.641
Phylopstem6.743638888888889
Phylopflank4.760794658749999
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure