Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCTACGTTGATCGTCCCAAGAAAGGGGCACCGTCTGCAGAACTTGCCAGGA
.(((((((.....(((((((..&.))))))).....))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001258324
GeneSymbolTP53I11
Binding site107,159
Score0.923
Seed1
Au0.338
Energy-22.6
Binding len21
Me-13.553
Phylopstem-0.8793842857142858
Phylopflank0.6787430550000002
Longest consecutive pairings7
Position of longest consecutive pairings13
Pairings in 3prime end6
Position5UTR
2D Structure