Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCTGGCTACAACAGCTGCC
..(((((((..((.((.(((.&)))...)).))..))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001258346
GeneSymbolPACRGL
Binding site1900,1921
Score0.923
Seed1
Au0.529
Energy-18.4
Binding len21
Me-9.881
Phylopstem-0.2868457857142857
Phylopflank-0.31724739275
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure