Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGAAAACCCTGTGCCGGGG
.(((((((((............&.))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001258359
GeneSymbolHPCAL1
Binding site346,366
Score0.846
Seed1
Au0.397
Energy-15.7
Binding len11
Me-13.079
Phylopstem-0.31054846666666663
Phylopflank-0.8589547637500001
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end0
Position5UTR
2D Structure