Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GTGGGAAGGGTGGGGACGAGGCGTCGGGAGGGTATACAGGGA
...(((((((.(((((((((.&))))))))).))........................))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001258359
GeneSymbolHPCAL1
Binding site1505,1547
Score0.846
Seed0
Au0.279
Energy-25.9
Binding len42
Me-9.339
Phylopstem0.34581002222222224
Phylopflank0.030095695000000013
Longest consecutive pairings9
Position of longest consecutive pairings33
Pairings in 3prime end7
Position3UTR
2D Structure