Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCCTGTGGCCATCAGGGCTGGAGGGAAGGAGGCCAGG
..((((((((((((((((((((&)))))))..................))))))))).)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001363656
GeneSymbolPPP2R1A
Binding site5283,5323
Score0.923
Seed1
Au0.368
Energy-26.7
Binding len40
Me-4.957
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings6
Pairings in 3prime end8
Position3UTR
2D Structure