Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAAGCGGGAGAGCGAGAAGGCGGAACAGGAGAGGCTGGCGCGGCTGCGGC
(((((((((((.(.((.....&.)).).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001258374
GeneSymbolEPS15L1
Binding site2641,2693
Score0.923
Seed1
Au0.279
Energy-21.5
Binding len18
Me-8.141
Phylopstem4.170565727272727
Phylopflank5.267655577374999
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure