Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTTCAAAAATAAAGCCTTGTTATTTAGCAACAACACGCAAGAGTTGCAT
.((((((((((((((((((((&.)))))...........))))).))))...)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001258375
GeneSymbolEPS15L1
Binding site1822,1873
Score0.846
Seed1
Au0.544
Energy-20.6
Binding len37
Me-3.793
Phylopstem3.254070531428571
Phylopflank3.4757716774999996
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure