Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TGTTATAAACGTGGCTGCT
..(((((((((..(((((.(.&).)))))..))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001363656
GeneSymbolPPP2R1A
Binding site361,380
Score0.846
Seed1
Au0.5
Energy-20.2
Binding len19
Me-9.593
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure