Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGAACAACCGCGCCAGTTTCAAGGGCTGCAC
.(((((((((((((((..(((&)))..))))))))............))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001258393
GeneSymbolCLPB
Binding site650,683
Score0.846
Seed1
Au0.441
Energy-24.9
Binding len33
Me-3.793
Phylopstem-0.34509014814814826
Phylopflank-0.03453498062500002
Longest consecutive pairings8
Position of longest consecutive pairings20
Pairings in 3prime end6
PositionCDS
2D Structure