Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCGCACAGCACGCGCTGCAGC
(((((((.((((((((..(((&)))..))))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001258393
GeneSymbolCLPB
Binding site1383,1405
Score0.846
Seed1
Au0.382
Energy-22.3
Binding len22
Me-6.251
Phylopstem0.13272991111111118
Phylopflank0.1823982274999999
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure