Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&AGAGCTGCAGGCTGCAC
.(((((((((((((.(.....&).)))))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001258397
GeneSymbolCCDC103
Binding site181,198
Score0.846
Seed1
Au0.5
Energy-20.5
Binding len17
Me-4.529
Phylopstem2.338174942857143
Phylopflank1.75167516
Longest consecutive pairings8
Position of longest consecutive pairings7
Pairings in 3prime end2
PositionCDS
2D Structure