Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCAGCACAGCTGTAAG
(((((((((..((((..((((&)))))))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001258401
GeneSymbolSLC4A8
Binding site5446,5465
Score0.846
Seed1
Au0.529
Energy-20.6
Binding len19
Me-8.238
Phylopstem0.036935466666666666
Phylopflank-0.10165704874999994
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure