Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGAAGCCCAGCCGCCTGGCTGCAGC
(((((((((((((((...(((&.))))))))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001258415
GeneSymbolARHGAP20
Binding site986,1013
Score0.846
Seed1
Au0.426
Energy-25.1
Binding len22
Me-4.171
Phylopstem0.35887736352941174
Phylopflank0.030678857125
Longest consecutive pairings10
Position of longest consecutive pairings11
Pairings in 3prime end5
PositionCDS
2D Structure